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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921757.1_cds_XP_016470665.1_63088
CDS Infomation

[gene=LOC107792918] [db_xref=GeneID:107792918] [protein=tRNA pseudouridine synthase A-like isoform X3] [protein_id=XP_016470665.1] [location=join(37600..37881,37976..38032,38884..38961,41343..41425,41817..41916,41993..42055,43095..43373,43959..44019,44106..44212)] [gbkey=CDS]
Sequence

ATGACAAACGATCAATCACAGCCGTTGATCTCGGAGATTAGTAAGCACTCGCTCGATCCA
CGGCCTGAATCTCCCCAACGGCGTTCCAAAATCGCCAAGGTAAACGACGACAACATCGCC
GTCGACGTCGTTGAAGAGGAAGAGCAGAAAGAGTTAGTTACTAGACCAATGAATCCTAAT
CCTAGGCTACAGCGGTACTTGATAGCAATCGAGTACATAGGAACTCGCTTCGCCGGCGCA
CAGCAACAAACTAATTGTAGAACTGTCGTCGGTGTTCTTGAGGAAGCATTTCAGAAGTTT
GTTGGACAGCCAGTGTCTATATTTTGCTCCAGTCGAACTGATGCTGGAGTACACGCTTTA
TCAAATGTTTGCCATGTAGATGTTGAAAGGATAAGCAAAAGGAAACCTGGTGAAGTGAAG
AACGGGGGTGATATAATGGTTATTGACGTTCGGCGTGTTCCAGCTGATTTTCATGCCAGA
TATAAAGCTCAAGAACGCACGTACTTCTACCGCTTGTTATCTGGGCCGGAGTGGGTATCA
AGCTTCGAGAAAGACCGAGCTTGGCATGTGCCTGAGAGCCTGGATCTTCCTGCCATGCAG
AAGGCATGCAACGTTCTTGTTGGACGTCATGATTTCAGTTCTTTCAGAGCAGCTGCTTGT
CAGGCAAACTCACCCGTCAGAACTTTGGAAGAACTTAATGTTACTGAGGTTGTTTCAACT
CCATATTTTCCATCAATCTCAGAGAGACTAAGGAGCAATAGTGTGATGGAGGATCCAACT
GTATCCTTGGGTTCAGACACCAACTATTCCCGTACTTCTTTGACCTCCAATGAGGGGAAG
TCAGACGGCACAAATGGCGAGGCTTGCCAAGACTTTGGCCTTAGAAGAAAACACCGTTGC
TTTGTGGTGACAGCAAGAGCACGATCTTTCCTTTACCATCAGGTTAGGCTGCTTGTTGGA
GTCCTTAAAGCAGTTGGGGCTGGAGATCTAACAGTTCCTGATGTAGAACGCATCCTTGAA
GCAAAATCCATCACTGCTGCAAGTCCGATGGCTCCTGCTTGTGGTCTTTATCTTGGACAC
GTCAAATATGATCTGCCTCCCGAGACTTGA

Peptide Sequence

PEP ID

XP_016470665.1
PEP Infomation

PREDICTED: tRNA pseudouridine synthase A-like isoform X3 [Nicotiana tabacum]
Sequence

MTNDQSQPLISEISKHSLDPRPESPQRRSKIAKVNDDNIAVDVVEEEEQKELVTRPMNPN
PRLQRYLIAIEYIGTRFAGAQQQTNCRTVVGVLEEAFQKFVGQPVSIFCSSRTDAGVHAL
SNVCHVDVERISKRKPGEVKNGGDIMVIDVRRVPADFHARYKAQERTYFYRLLSGPEWVS
SFEKDRAWHVPESLDLPAMQKACNVLVGRHDFSSFRAAACQANSPVRTLEELNVTEVVST
PYFPSISERLRSNSVMEDPTVSLGSDTNYSRTSLTSNEGKSDGTNGEACQDFGLRRKHRC
FVVTARARSFLYHQVRLLVGVLKAVGAGDLTVPDVERILEAKSITAASPMAPACGLYLGH
VKYDLPPET

Transcript Sequence

Gene sequence data has not been registered.